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Intron Name: Anas_platyrhynchos_platyrhynchos_7_301405_302629_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

301405 - 302629

Intron Length:

1225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATCCTTA

5'SS Class:

strong_minor

3'SS Sequence:

TAATGCTCCGAAG|T

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTCCCCTTAATG

Flanking Amino Acid:

STYEPASKKIRHYSANACLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.2

58.9

42.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

57.7

0.17

1.1

57.1

38.4

Minor 5ss

83.3

1.12

1.4

81.8

38.5

Minor BPS

74.6

0.63

1.3

72.74

40.2

Associated Gene:

Gene:

AOX1

Ensembl Gene ID:

ENSAPLG00000008708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025359

264624 - 306968

42345

ENSAPLT00000022758

264624 - 306968

42345

ENSAPLT00000018331

263911 - 307009

43099

ENSAPLT00000009339

268146 - 306968

38823

ENSAPLT00000045156

267812 - 306968

39157