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Intron Name: Anas_platyrhynchos_platyrhynchos_7_30143948_30146405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30143948 - 30146405

Intron Length:

2458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

CTTGGTTGAACT

Flanking Amino Acid:

LVQKNLQRPTGLVVDQFSQR

Intron Amino Acid Position:

3766

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.5

38.6

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

46.7

-0.3

2.5

61.4

43.2

Minor BPS

49.8

0.06

71.98

45.3

Associated Gene:

Gene:

LRP1B

Ensembl Gene ID:

ENSAPLG00000023161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024637

30099962 - 30604152

504191