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Intron Name: Anas_platyrhynchos_platyrhynchos_7_30179917_30181487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30179917 - 30181487

Intron Length:

1571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

ATTCCTCCAACA

Flanking Amino Acid:

GDGSDEPKECPEFRCQPGRF

Intron Amino Acid Position:

3102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.3

66.3

39.6

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

92.5

0.96

0.6

85.6

29.1

Minor 5ss

34.8

-1.7

3.2

46.2

42.2

Minor BPS

50.9

0.03

1.9

68.7

37.1

Associated Gene:

Gene:

LRP1B

Ensembl Gene ID:

ENSAPLG00000023161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024637

30099962 - 30604152

504191