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Intron Name: Anas_platyrhynchos_platyrhynchos_7_30221763_30221822_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30221763 - 30221822

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGCTTCAT

5'SS Class:

weak_major

3'SS Sequence:

GGATAATTCATAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TAGTGGATAATT

Flanking Amino Acid:

EKNCGKFVFVFITCWMPTAA

Intron Amino Acid Position:

2417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.6

0.01

1.1

51.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

58.6

0.19

50.6

42.6

Minor 5ss

32.4

-2

3.3

50.3

Minor BPS

43.5

-0.4

2.5

65.66

45.1

Associated Gene:

Gene:

LRP1B

Ensembl Gene ID:

ENSAPLG00000023161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024637

30099962 - 30604152

504191