Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_30296278_30296673_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30296278 - 30296673

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTACTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TAATCTTAAATT

Flanking Amino Acid:

FEKRIVWTDARSDAIYSALY

Intron Amino Acid Position:

1303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

71.1

35.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.7

0.64

0.9

70.2

Minor 5ss

36.7

-1.5

3.1

47.8

47.6

Minor BPS

64.4

0.53

1.6

77.68

39.1

Associated Gene:

Gene:

LRP1B

Ensembl Gene ID:

ENSAPLG00000023161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024637

30099962 - 30604152

504191