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Intron Name: Anas_platyrhynchos_platyrhynchos_7_30340189_30345333_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30340189 - 30345333

Intron Length:

5145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGCAAT

5'SS Class:

major

3'SS Sequence:

CCTTCTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAATCTTTTATT

Flanking Amino Acid:

GTERETILKDDLDNVEGIAV

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

70.6

41.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

82.1

0.72

0.7

80.1

25.2

Minor 5ss

39.8

-1.1

3.2

53.5

Minor BPS

64.2

0.53

1.6

77.68

39.1

Associated Gene:

Gene:

LRP1B

Ensembl Gene ID:

ENSAPLG00000023161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024637

30099962 - 30604152

504191