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Intron Name: Anas_platyrhynchos_platyrhynchos_7_30349292_30351660_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30349292 - 30351660

Intron Length:

2369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

AAATAATGATTT

Flanking Amino Acid:

KRHTVIKGRQVRHLCGLAVF

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

76.8

0.67

40.9

Major PPT

87.2

0.84

0.7

79.8

32.2

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

41.4

-0.5

1.9

56.28

39.2

Associated Gene:

Gene:

LRP1B

Ensembl Gene ID:

ENSAPLG00000023161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024637

30099962 - 30604152

504191