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Intron Name: Anas_platyrhynchos_platyrhynchos_7_30940656_30942919_F

Intron Information:

Intron Rank:

124347

Intron Class:

major

Intron Phase:

Intron Coordinates:

30940656 - 30942919

Intron Length:

2264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTACTTTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

100

1.24

0.5

100

Major PPT

85.4

0.8

0.9

76.9

42.1

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

53.6

0.19

1.7

73.31

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047238

30940487 - 30943042

2556