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Intron Name: Anas_platyrhynchos_platyrhynchos_7_31001158_31001766_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
31001158 - 31001766

Intron Length:
609

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTT|GTAAGACCG

5'SS Class:
major

3'SS Sequence:
ATCCTGTTTGAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
TTTTCTTTCATC

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.1
0.43
1.1
54.7
42.3

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
67.4
0.39
1.1
67.3
37.6

Minor 5ss
34.9
-1.7
3.1
47
42.2

Minor BPS
70.8
0.64
1.7
81.67
33.1

Associated Gene:

Gene:
KYNU

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

31000681 - 31060693
60013