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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_31013296_31019889_F

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
31013296 - 31019889
Intron Length:
6594

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAC|GTGAGTGTG
5'SS Class:
major
3'SS Sequence:
TCTTCTCTTTCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
CTGTTTTCATCT
Flanking Amino Acid:
LDEELDKWARTGVHGHFNGQ
Intron Amino Acid Position:
97

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.9
0.59
1.3
72.2
39.5
Major BPS
100
1.24
0.5
100
0
Major PPT
90.3
0.91
0.6
88.5
21.1
Minor 5ss
32.2
-2
3.3
39.4
39.8
Minor BPS
48.9
-0
1.8
66.91
44.5

Associated Gene:

Gene:
KYNU
Ensembl Gene ID:
ENSAPLG00000008142
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000008461
31007910 - 31060693
52784
ENSAPLT00000038797
31000681 - 31060693
60013
ENSAPLT00000036241
31000681 - 31061052
60372
ENSAPLT00000025810
31000681 - 31060693
60013