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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_31124971_31128705_F

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
31124971 - 31128705
Intron Length:
3735

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACG|GTAAGCAAT
5'SS Class:
strong_major
3'SS Sequence:
TCTTTTCTTGCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
AATAAAT
U12 Branch Point Sequence:
TTTGCCTGAATA
Flanking Amino Acid:
ADIISTQDHTVVEKEGYLLK
Intron Amino Acid Position:
80

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82.8
0.77
1
78.3
37.9
Major BPS
65.7
0.39
1
71.3
30.3
Major PPT
92.5
0.96
0.6
88.3
21.4
Minor 5ss
41.5
-0.9
3
58.5
45.8
Minor BPS
70.9
0.65
1.5
80.19
36

Associated Gene:

Gene:
ARHGAP15
Ensembl Gene ID:
ENSAPLG00000008021
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000025308
31076813 - 31407565
330753
ENSAPLT00000008343
31076813 - 31407565
330753