Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_31271120_31280069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31271120 - 31280069

Intron Length:

8950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCAAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

TTTTCCCAAATG

Flanking Amino Acid:

KTLQEKGLIKDQIFGSHLHL

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.8

79.2

29.8

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

69.7

0.44

63.4

36.1

Minor 5ss

43.5

-0.7

2.7

45.7

Minor BPS

58.1

0.12

2.1

71.93

41.3

Associated Gene:

Gene:

ARHGAP15

Ensembl Gene ID:

ENSAPLG00000008021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025308

31076813 - 31407565

330753

ENSAPLT00000008343

31076813 - 31407565

330753