Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_31346877_31384283_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31346877 - 31384283

Intron Length:

37407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATTT

Flanking Amino Acid:

CFFEQFVEAIKIPDNATRIK

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.5

27.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.2

0.9

0.6

89.9

18.2

Minor 5ss

37.7

-1.4

2.7

44.2

Minor BPS

64.2

0.52

1.5

78.46

Associated Gene:

Gene:

ARHGAP15

Ensembl Gene ID:

ENSAPLG00000008021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025308

31076813 - 31407565

330753

ENSAPLT00000008343

31076813 - 31407565

330753