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Intron Name: Anas_platyrhynchos_platyrhynchos_7_31656131_31669817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

31656131 - 31669817

Intron Length:

13687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

TTTCCCCTCAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.5

39.7

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

0.56

72.9

32.3

Minor 5ss

45.4

-0.5

3.1

65.8

45.3

Minor BPS

47.3

-0.3

2.2

63.25

43.9

Associated Gene:

Gene:

GTDC1

Ensembl Gene ID:

ENSAPLG00000007900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024505

31501986 - 31678592

176607