Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_316996_317619_R

Intron Information:

Intron Rank:

134551

Intron Class:

major

Intron Phase:

Intron Coordinates:

316996 - 317619

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTAACA

5'SS Class:

major

3'SS Sequence:

TCATTAAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

ATGTCATTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

67.2

Major BPS

73.5

0.58

79.3

29.4

Major PPT

69.7

0.44

63.2

41.1

Minor 5ss

32.4

-2

3.1

41.5

44.6

Minor BPS

66.1

0.58

1.7

81.34

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020618

311721 - 319464

7744