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Intron Name: Anas_platyrhynchos_platyrhynchos_7_31710215_31710341_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
31710215 - 31710341

Intron Length:
127

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATTCCTA

5'SS Class:
major

3'SS Sequence:
CATTACTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTGAT

U12 Branch Point Sequence:
ATTTACAGAGCA

Flanking Amino Acid:
SGSYSQHMNHRGTLTQRRER

Intron Amino Acid Position:
1076

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.1
0.5
1.1
63.5
42.4

Major BPS
83.5
0.83
0.8
71.6
36.4

Major PPT
71.7
0.49
0.9
62.2
39.2

Minor 5ss
47.6
-0.2
2.8
65.3
45.9

Minor BPS
46
-0.3
2.1
65.48
40

Associated Gene:

Gene:
ZEB2

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

31709931 - 31753516
43586