Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_31726673_31727344_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31726673 - 31727344

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGCTG

5'SS Class:

major

3'SS Sequence:

TCCCGGGGCGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGGC

U12 Branch Point Sequence:

TTTGGCCTGCCT

Flanking Amino Acid:

TPEANGQEENDLPPGTPDAF

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

60.8

45.3

Major BPS

34.2

-0.9

4.2

63.1

44.5

Major PPT

55.4

0.12

48.3

39.3

Minor 5ss

29.4

-2.4

3.4

39.3

Minor BPS

36.4

-0.9

3.7

71.61

45.6

Associated Gene:

Gene:

ZEB2

Ensembl Gene ID:

ENSAPLG00000007687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032659

31709286 - 31777808

68523

ENSAPLT00000019929

31709286 - 31753516

44231

ENSAPLT00000007999

31709931 - 31753516

43586

ENSAPLT00000034977

31709286 - 31814689

105404