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Intron Name: Anas_platyrhynchos_platyrhynchos_7_31883_32426_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31883 - 32426

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACTTCAGTAAGT

Flanking Amino Acid:

SFAGSHKFAQVLGTDNMEQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

70.7

41.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.3

0.89

0.7

88.4

28.3

Minor 5ss

33.6

-1.9

2.9

45.3

Minor BPS

-0.1

2.4

71.16

45.6

Associated Gene:

Gene:

TRAK2

Ensembl Gene ID:

ENSAPLG00000014773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015441

26351 - 43887

17537