Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_31989443_32001024_F

Intron Information:

Intron Rank:

141955

Intron Class:

major

Intron Phase:

Intron Coordinates:

31989443 - 32001024

Intron Length:

11582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTATATTTCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTATATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

82.3

32.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.4

0.64

0.8

77.6

36.2

Minor 5ss

44.3

-0.6

2.8

53.4

43.8

Minor BPS

49.5

0.04

1.8

71.56

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031273

31987779 - 32003195

15417