Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_32394146_32394534_R

Intron Information:

Intron Rank:

154744

Intron Class:

major

Intron Phase:

Intron Coordinates:

32394146 - 32394534

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGATAAT

5'SS Class:

major

3'SS Sequence:

CTTTCTCACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GCTTTCTCACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

80.3

34.3

Major BPS

0.87

0.8

85.6

Major PPT

72.8

0.51

0.8

66.4

34.7

Minor 5ss

35.4

-1.7

3.2

50.1

46.4

Minor BPS

53.9

0.2

1.9

72.31

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018392

32393612 - 32413311

19700