About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_32403150_32405759_R


Intron Information:

Intron Rank:
154747

Intron Class:
major

Intron Phase:

Intron Coordinates:
32403150 - 32405759

Intron Length:
2610

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGTGTCTC

5'SS Class:
strong_major

3'SS Sequence:
CTCATGCTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTGCTGAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.4
0.79
0.9
74
36.6

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
75.7
0.58
0.9
68.7
37.1

Minor 5ss
39.4
-1.2
2.9
52.4
44.8

Minor BPS
65.2
0.46
1.9
79.19
36.3

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32402980 - 32413232
10253