About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_32405994_32413181_R


Intron Information:

Intron Rank:
154748

Intron Class:
major

Intron Phase:

Intron Coordinates:
32405994 - 32413181

Intron Length:
7188

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGTGCA

5'SS Class:
strong_major

3'SS Sequence:
CTTTCTTTCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTCAC

U12 Branch Point Sequence:
CTTTCTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
95.6
1.07
0.7
84.1
26.6

Major BPS
74.9
0.62
1.1
77.4
37.4

Major PPT
87.5
0.84
0.7
83
25.4

Minor 5ss
33
-1.9
3.1
41.6
45

Minor BPS
69.1
0.59
1.7
78.6
38.6

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32402980 - 32413232
10253