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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33066325_33066618_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
33066325 - 33066618

Intron Length:
294

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATTTAAA

5'SS Class:
major

3'SS Sequence:
TTTTCTTTTTAAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AAATGAT

U12 Branch Point Sequence:
TTTCTTTTTAAG

Flanking Amino Acid:
FAQKWNNNVQHLSVDKTVND

Intron Amino Acid Position:
255

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.5
0.69
1
77.8
31.4

Major BPS
68
0.45
1
57.8
39

Major PPT
85.2
0.79
0.9
90.8
21.8

Minor 5ss
41.2
-1
2.5
51
45.5

Minor BPS
49.4
-0.1
1.8
61.38
40.3

Associated Gene:

Gene:
ORC4

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33062026 - 33078254
16229