Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_33070994_33071404_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33070994 - 33071404

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CGTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCATGAAAA

Flanking Amino Acid:

KENLLEVRLNGLLQTNDKVA

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

82.6

32.9

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

0.83

0.7

84.6

30.3

Minor 5ss

25.9

-2.8

3.6

33.6

35.6

Minor BPS

56.6

0.2

1.8

71.17

40.3

Associated Gene:

Gene:

ORC4

Ensembl Gene ID:

ENSAPLG00000010668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011165

33062026 - 33078254

16229