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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3313193_3332283_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3313193 - 3332283

Intron Length:

19091

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

GTTGCCTTCACC

Flanking Amino Acid:

DGHYARTDYAENANKLEESA

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

75.6

34.9

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

80.5

0.69

0.7

74.9

27.2

Minor 5ss

47.4

-0.3

3.1

66.9

44.7

Minor BPS

64.7

0.44

1.9

75.04

41.8

Associated Gene:

Gene:

TMEFF2

Ensembl Gene ID:

ENSAPLG00000014055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014678

3234587 - 3339940

105354