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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33188067_33189720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33188067 - 33189720

Intron Length:

1654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGAATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TGTGTTTGAATT

Flanking Amino Acid:

LNPLLGTGLLGDMSSINTTL

Intron Amino Acid Position:

1189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

74.6

0.61

1.4

34.5

Major PPT

74.7

0.56

66.5

43.2

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

56.6

0.29

1.5

72.62

Associated Gene:

Gene:

MBD5

Ensembl Gene ID:

ENSAPLG00000010489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010936

33151846 - 33203532

51687