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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33189933_33191708_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33189933 - 33191708

Intron Length:

1776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAAGC

5'SS Class:

major

3'SS Sequence:

CCTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CAATTTCCATCT

Flanking Amino Acid:

PMACLFQNFQVRMQEDAAVL

Intron Amino Acid Position:

1260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

63.2

41.7

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

92.4

0.95

0.6

91.3

20.2

Minor 5ss

31.8

-2.1

3.3

43.2

Minor BPS

40.7

-0.6

1.9

54.35

41.3

Associated Gene:

Gene:

MBD5

Ensembl Gene ID:

ENSAPLG00000010489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010936

33151846 - 33203532

51687