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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33201288_33203398_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33201288 - 33203398

Intron Length:

2111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TACTTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

CCTTTGCTAACT

Flanking Amino Acid:

MSELDKMSGNVHQIPQGDRQ

Intron Amino Acid Position:

1713

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

84.3

27.2

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

0.65

0.8

77.1

36.8

Minor 5ss

47.2

-0.3

2.8

66.2

38.1

Minor BPS

48.4

-0

2.3

71.51

45.7

Associated Gene:

Gene:

MBD5

Ensembl Gene ID:

ENSAPLG00000010489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010936

33151846 - 33203532

51687