Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_33321846_33323859_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33321846 - 33323859

Intron Length:

2014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TCTGTGTGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

ATGCCTTTAAGA

Flanking Amino Acid:

GIIGTNDVKTLADVNGVIEE

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

63.8

43.3

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

70.9

0.47

69.2

41.8

Minor 5ss

41.8

-0.9

2.8

54.9

43.3

Minor BPS

59.9

0.31

1.6

66.88

39.8

Associated Gene:

Gene:

KIF5C

Ensembl Gene ID:

ENSAPLG00000005832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006106

33280769 - 33343435

62667