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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33380566_33381865_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

33380566 - 33381865

Intron Length:

1300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

ACCCCCTAAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

38.3

Major BPS

84.6

0.86

41.2

Major PPT

82.7

0.74

0.7

76.7

31.9

Minor 5ss

45.6

-0.5

2.9

46.2

Minor BPS

56.9

0.21

1.7

62.86

43.4

Associated Gene:

Gene:

LYPD6B

Ensembl Gene ID:

ENSAPLG00000006734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027736

33366587 - 33385881

19295

ENSAPLT00000006985

33375160 - 33385820

10661