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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33414893_33434269_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

33414893 - 33434269

Intron Length:

19377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

ATTTCCTCACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.4

39.6

Major BPS

72.4

0.56

73.5

32.5

Major PPT

69.6

0.44

0.9

39.9

Minor 5ss

37.7

-1.4

3.2

52.9

44.2

Minor BPS

63.2

0.49

1.8

82.67

38.9

Associated Gene:

Gene:

LYPD6

Ensembl Gene ID:

ENSAPLG00000006742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006989

33414668 - 33439559

24892