Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_33451699_33453582_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33451699 - 33453582

Intron Length:

1884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

CCTTCTCTTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GTTTTGATACCT

Flanking Amino Acid:

EDEREMLLENFINGAKEICY

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.3

76.2

39.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

75.1

0.56

78.8

27.2

Minor 5ss

37.5

-1.4

2.7

45.1

35.9

Minor BPS

45.7

-0.2

2.4

72.99

43.8

Associated Gene:

Gene:

MMADHC

Ensembl Gene ID:

ENSAPLG00000006746

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007019

33450043 - 33460131

10089