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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33612214_33616925_R

Intron Information:

Intron Rank:

138870

Intron Class:

major

Intron Phase:

Intron Coordinates:

33612214 - 33616925

Intron Length:

4712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

TGTTACAGGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.2

30.7

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

37.9

-1.4

2.9

40.8

45.4

Minor BPS

47.2

-0.1

1.9

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037216

33611687 - 33617249

5563