Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_33642099_33642831_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33642099 - 33642831

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTCTG

5'SS Class:

major

3'SS Sequence:

TCTCTATGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

ATTTCTCTATGT

Flanking Amino Acid:

QNFLSVPPFMDTGRAAKSAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

67.3

43.6

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

77.9

0.63

0.9

36.2

Minor 5ss

-1.3

47.3

42.4

Minor BPS

48.7

-0

2.2

74.75

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041606

33640403 - 33643286

2884