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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33682544_33683138_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33682544 - 33683138

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTCTT

5'SS Class:

strong_major

3'SS Sequence:

AACTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATGCGTGTAACT

Flanking Amino Acid:

HFPQLCKVFKAHISSTNSEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

38.1

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

81.7

0.71

0.9

73.3

41.1

Minor 5ss

39.1

-1.2

3.3

58.7

45.8

Minor BPS

45.9

-0.2

2.3

67.18

43.9

Associated Gene:

Gene:

RIF1

Ensembl Gene ID:

ENSAPLG00000007092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020939

33681723 - 33710109

28387

ENSAPLT00000007400

33681723 - 33710109

28387