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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33683236_33685444_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33683236 - 33685444

Intron Length:

2209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ATCCTGCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

CAGAGTTTGACT

Flanking Amino Acid:

FNSKITSELPATEVHDLLST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

77.3

0.61

0.9

73.3

36.6

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

47.5

-0.1

1.8

59.91

44.1

Associated Gene:

Gene:

RIF1

Ensembl Gene ID:

ENSAPLG00000007092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020939

33681723 - 33710109

28387

ENSAPLT00000007400

33681723 - 33710109

28387