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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33686281_33687178_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33686281 - 33687178

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

CTTGTATAAATT

Flanking Amino Acid:

AAVTEHLMTTKLISELQKLF

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

73.1

43.9

Major BPS

74.5

0.61

79.6

29.1

Major PPT

79.3

0.66

0.8

73.8

31.3

Minor 5ss

35.6

-1.6

2.7

43.3

43.7

Minor BPS

47.5

-0.1

67.73

43.9

Associated Gene:

Gene:

RIF1

Ensembl Gene ID:

ENSAPLG00000007092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020939

33681723 - 33710109

28387

ENSAPLT00000007400

33681723 - 33710109

28387