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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33691420_33692247_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33691420 - 33692247

Intron Length:

828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCTTT

5'SS Class:

weak_major

3'SS Sequence:

TACTTTATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTTACTTTATTC

Flanking Amino Acid:

NGYVKTAIESGNKKEKQGSE

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

78.8

38.3

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

77.9

0.63

0.8

70.6

39.6

Minor 5ss

68.6

0.63

2.3

82.3

37.5

Minor BPS

64.4

0.43

1.6

74.73

36.3

Associated Gene:

Gene:

RIF1

Ensembl Gene ID:

ENSAPLG00000007092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020939

33681723 - 33710109

28387

ENSAPLT00000007400

33681723 - 33710109

28387