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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33692789_33693742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33692789 - 33693742

Intron Length:

954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTGCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

ATTGCTTTGACA

Flanking Amino Acid:

YQVADMDLLNGTPALFLIQL

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

77.8

30.1

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

70.5

0.46

1.1

71.6

38.5

Minor 5ss

35.4

-1.7

3.3

41.4

Minor BPS

70.1

0.63

1.3

76.23

34.9

Associated Gene:

Gene:

RIF1

Ensembl Gene ID:

ENSAPLG00000007092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020939

33681723 - 33710109

28387

ENSAPLT00000007400

33681723 - 33710109

28387