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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33698562_33698849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33698562 - 33698849

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

AATACTAAAACT

Flanking Amino Acid:

PKAYSNLNNKLEKLLAEIIQ

Intron Amino Acid Position:

885

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.2

33.8

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

82.2

0.72

0.7

80.8

24.4

Minor 5ss

43.2

-0.7

2.9

57.8

46.8

Minor BPS

48.5

-0

1.9

69.43

41.1

Associated Gene:

Gene:

RIF1

Ensembl Gene ID:

ENSAPLG00000007092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020939

33681723 - 33710109

28387

ENSAPLT00000007400

33681723 - 33710109

28387