Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_33699579_33699957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33699579 - 33699957

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTGATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTTCCTTGATT

Flanking Amino Acid:

EEHSAPFSDETENSQWDAKM

Intron Amino Acid Position:

986

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

72.8

0.51

0.9

74.4

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

89.6

1.33

0.7

99.24

21.9

Associated Gene:

Gene:

RIF1

Ensembl Gene ID:

ENSAPLG00000007092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020939

33681723 - 33710109

28387

ENSAPLT00000007400

33681723 - 33710109

28387