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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33701236_33702274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33701236 - 33702274

Intron Length:

1039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTAAT

5'SS Class:

major

3'SS Sequence:

GGTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCCAACGTAACC

Flanking Amino Acid:

EHQKEVLRSKRIGIPAMYNN

Intron Amino Acid Position:

1077

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

80.8

32.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.1

0.68

76.9

42.1

Minor 5ss

39.8

-1.1

2.5

51.4

45.2

Minor BPS

47.2

-0.2

2.2

59.78

45.3

Associated Gene:

Gene:

RIF1

Ensembl Gene ID:

ENSAPLG00000007092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020939

33681723 - 33710109

28387

ENSAPLT00000007400

33681723 - 33710109

28387