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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33702507_33703769_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33702507 - 33703769

Intron Length:

1263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAGAT

U12 Branch Point Sequence:

GTTTTTGGGACA

Flanking Amino Acid:

AKEDNKNNPQEENEKSEGCI

Intron Amino Acid Position:

1126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.3

Major BPS

71.4

0.53

39.8

Major PPT

67.6

0.4

1.2

64.5

45.9

Minor 5ss

42.9

-0.8

2.8

44.3

Minor BPS

46.1

-0.3

2.1

62.79

37.6

Associated Gene:

Gene:

RIF1

Ensembl Gene ID:

ENSAPLG00000007092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020939

33681723 - 33710109

28387

ENSAPLT00000007400

33681723 - 33710109

28387