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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33707763_33708489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33707763 - 33708489

Intron Length:

727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

TTTAGCATAATG

Flanking Amino Acid:

VILPQITSNICARGLGQLIR

Intron Amino Acid Position:

2149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

67.7

0.44

38.9

Major PPT

78.3

0.64

0.8

72.7

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

49.9

-0.1

2.1

65.07

42.9

Associated Gene:

Gene:

RIF1

Ensembl Gene ID:

ENSAPLG00000007092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020939

33681723 - 33710109

28387

ENSAPLT00000007400

33681723 - 33710109

28387