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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33742403_33742963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33742403 - 33742963

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCACTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

ACTGCTTAAAAT

Flanking Amino Acid:

ALNNAILSSDVKYKEKHNKA

Intron Amino Acid Position:

1821

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

68.7

0.42

62.8

38.7

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

49.4

0.04

1.9

66.8

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007684

33741306 - 33771692

30387