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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33750724_33751179_R


Intron Information:

Intron Rank:
34

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
33750724 - 33751179

Intron Length:
456

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTATGTAGT

5'SS Class:
major

3'SS Sequence:
TTTTTCTTACCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
TTTTTCTTACCA

Flanking Amino Acid:
AKRAYLNASDLRYKETFENT

Intron Amino Acid Position:
1470

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.2
0.64
1
76.5
38.6

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
87.3
0.84
0.8
82.2
34.2

Minor 5ss
46
-0.4
2.6
64.1
40.5

Minor BPS
76.8
0.84
1.5
86.69
32.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33741306 - 33771692
30387