Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_33754374_33755306_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33754374 - 33755306

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGCCACTTCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

TTTTTTGCCACT

Flanking Amino Acid:

AKHVQYIGSDLKYKEAYEHM

Intron Amino Acid Position:

1189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

68.7

0.47

0.9

67.9

Major PPT

67.1

0.38

0.9

60.7

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

45.1

-0.3

2.5

74.97

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007684

33741306 - 33771692

30387