Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_33759210_33759673_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33759210 - 33759673

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

AGTTTTTTACTC

Flanking Amino Acid:

VQNLKHLFSNNLYKEAWDRV

Intron Amino Acid Position:

907

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

79.6

0.67

0.8

73.6

31.1

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

56.6

0.19

1.5

64.4

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007684

33741306 - 33771692

30387