Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_33759975_33760545_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33759975 - 33760545

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCAAG

5'SS Class:

major

3'SS Sequence:

TCTGTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTATTATTACTT

Flanking Amino Acid:

AKKSYDLQSQIKYTAAGKEN

Intron Amino Acid Position:

837

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

71.6

40.1

Major BPS

84.7

0.86

74.3

40.7

Major PPT

82.1

0.72

0.8

80.6

31.5

Minor 5ss

40.4

-1.1

2.9

41.4

Minor BPS

56.3

0.28

1.8

77.4

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007684

33741306 - 33771692

30387