Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_33768209_33769385_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33768209 - 33769385

Intron Length:

1177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTTACCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TGCTCTTTACCA

Flanking Amino Acid:

AKASREIASDYKYKLDHEKQ

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

77.9

0.69

78.3

31.3

Major PPT

61.2

0.25

1.1

59.8

39.9

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

64.6

0.45

1.6

71.5

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007684

33741306 - 33771692

30387